STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09323.1PFAM: protein of unknown function DUF1121; KEGG: wsu:WS1833 hypothetical protein. (212 aa)    
Predicted Functional Partners:
ACZ10112.1
KEGG: dps:DP0269 Fe-S oxidoreductase.
 
 
 0.763
ACZ09322.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: dds:Ddes_0873 protein of unknown function DUF6 transmembrane.
  
    0.683
ACZ07428.1
TIGRFAM: sulfite reductase, subunit A; KEGG: aha:AHA_2575 anaerobic sulfite reductase subunit A.
  
 
 0.661
ACZ09324.1
KEGG: smt:Smal_1164 hypothetical protein.
     
 0.538
ACZ10449.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.451
ACZ07665.1
TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: afw:Anae109_2748 putative trifunctional 2- polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein.
  
 
 0.436
ACZ09633.1
KEGG: dde:Dde_1149 hypothetical protein.
  
     0.407
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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