STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09327.1KEGG: plu:plu2327 hypothetical protein. (315 aa)    
Predicted Functional Partners:
ACZ09326.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: prw:PsycPRwf_0549 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.
 
     0.637
ACZ09328.1
KEGG: nis:NIS_1628 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
       0.425
ACZ09263.1
PFAM: ABC-2 type transporter; KEGG: geo:Geob_1442 ABC-2 type transporter.
  
    0.423
ACZ08671.1
PFAM: glycosyl transferase family 2; KEGG: bbr:BB4029 putative glycosyl transferase.
 
  
 0.416
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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