Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09359.1KEGG: atc:AGR_C_820 hypothetical protein. (142 aa)    
Predicted Functional Partners:
ACZ09358.1
Hypothetical protein.
       0.718
ACZ09357.1
KEGG: hypothetical protein.
       0.689
ACZ09326.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: prw:PsycPRwf_0549 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.
 
   
 0.565
ACZ09093.1
KEGG: pcr:Pcryo_0212 negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.
 
   
 0.562
ACZ09363.1
Hypothetical protein; KEGG: sea:SeAg_B4453 putative phage tail protein.
  
    0.534
ACZ09367.1
PFAM: terminase GpA; KEGG: spe:Spro_4922 terminase GpA.
  
    0.529
ACZ08421.1
PFAM: Barstar (barnase inhibitor); KEGG: plu:plu4062 hypothetical protein.
  
     0.520
ACZ09362.1
Hypothetical protein; KEGG: ecq:ECED1_0877 putative phage tail fiber protein.
       0.476
ACZ09364.1
Hypothetical protein; KEGG: spe:Spro_4957 baseplate J family protein.
       0.472
ACZ09360.1
Hypothetical protein.
       0.445
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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