STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09365.1KEGG: spe:Spro_4921 lambda family phage portal protein. (245 aa)    
Predicted Functional Partners:
ACZ09367.1
PFAM: terminase GpA; KEGG: spe:Spro_4922 terminase GpA.
 
  
 0.957
ACZ09363.1
Hypothetical protein; KEGG: sea:SeAg_B4453 putative phage tail protein.
 
  
 0.946
ACZ09364.1
Hypothetical protein; KEGG: spe:Spro_4957 baseplate J family protein.
 
   
 0.944
ACZ09362.1
Hypothetical protein; KEGG: ecq:ECED1_0877 putative phage tail fiber protein.
 
  
 0.932
ACZ07796.1
KEGG: spe:Spro_4910 late control D family protein.
 
   
 0.829
ACZ07792.1
PFAM: major tail tube protein; KEGG: spe:Spro_4913 major tail tube protein.
 
   
 0.827
ACZ07791.1
KEGG: spe:Spro_4914 hypothetical protein.
 
  
 0.824
ACZ07801.1
Hypothetical protein; KEGG: ect:ECIAI39_4427 putative phage tail protein.
 
  
 0.820
ACZ07800.1
PFAM: Baseplate J family protein; KEGG: spe:Spro_4957 baseplate J family protein.
 
   
 0.810
ACZ07798.1
KEGG: actin binding protein.
 
    0.794
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.