STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09394.1PFAM: branched-chain amino acid transport. (101 aa)    
Predicted Functional Partners:
ACZ09393.1
PFAM: AzlC family protein; KEGG: abb:ABBFA_002009 AzlC family protein.
 
  
 0.964
ACZ07520.1
PFAM: AzlC family protein; KEGG: sse:Ssed_2539 branched-chain amino acid transport protein AzlC.
 
  
 0.853
ACZ07521.1
PFAM: branched-chain amino acid transport.
  
     0.740
ACZ09392.1
Hypothetical protein; KEGG: xca:xccb100_1399 putative secreted protein.
       0.559
ACZ09395.1
PFAM: ROK family protein; KEGG: rec:RHECIAT_CH0001621 probable transcriptional regulator protein, ROK family.
       0.460
ACZ09852.1
KEGG: aha:AHA_2343 hypothetical protein.
  
     0.410
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.