STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09478.1KEGG: ara:Arad_4329 hypothetical protein. (245 aa)    
Predicted Functional Partners:
ACZ09479.1
KEGG: smt:Smal_3964 hypothetical protein.
 
     0.874
ACZ08060.1
KEGG: hypothetical protein.
  
     0.682
ACZ08425.1
KEGG: azo:azo2623 hypothetical protein.
  
     0.553
ACZ07580.1
Hypothetical protein.
  
     0.528
ACZ09893.1
KEGG: nse:NSE_0416 putative competence protein F.
  
    0.513
ACZ10402.1
KEGG: acp:A2cp1_3952 hypothetical protein.
  
     0.506
ACZ10833.1
KEGG: rfr:Rfer_2477 hypothetical protein.
  
     0.493
ACZ08924.1
KEGG: ank:AnaeK_3866 hypothetical protein.
  
     0.476
ACZ09477.1
Hypothetical protein.
       0.470
ACZ09279.1
PFAM: Prephenate dehydrogenase; KEGG: maq:Maqu_1025 3-phosphoshikimate 1- carboxyvinyltransferase.
  
    0.467
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.