STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09486.1PFAM: MscS Mechanosensitive ion channel; KEGG: tcx:Tcr_1584 MscS mechanosensitive ion channel. (280 aa)    
Predicted Functional Partners:
ACZ09485.1
PFAM: beta-lactamase domain protein; KEGG: pmr:PMI0732 metallo-beta-lactamase superfamily protein.
       0.773
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.718
ACZ09488.1
Uracil-DNA glycosylase-like protein; KEGG: sat:SYN_02178 uracil DNA glycosylase superfamily protein.
     
 0.544
ACZ09489.1
PFAM: beta-lactamase domain protein; KEGG: gur:Gura_2063 beta-lactamase domain- containing protein.
       0.510
ACZ10234.1
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sat:SYN_01968 sodium driven multidrug efflux pump.
 
    0.464
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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