STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACZ09488.1Uracil-DNA glycosylase-like protein; KEGG: sat:SYN_02178 uracil DNA glycosylase superfamily protein. (184 aa)    
Predicted Functional Partners:
ACZ09489.1
PFAM: beta-lactamase domain protein; KEGG: gur:Gura_2063 beta-lactamase domain- containing protein.
       0.807
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.608
ACZ09486.1
PFAM: MscS Mechanosensitive ion channel; KEGG: tcx:Tcr_1584 MscS mechanosensitive ion channel.
     
 0.544
ACZ09485.1
PFAM: beta-lactamase domain protein; KEGG: pmr:PMI0732 metallo-beta-lactamase superfamily protein.
       0.531
ACZ07491.1
PFAM: peptidase M22 glycoprotease; KEGG: pca:Pcar_1913 metal-dependent protease.
  
    0.502
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
 
     0.477
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.461
ACZ07069.1
Carboxyl-terminal protease; KEGG: tdn:Suden_0492 peptidase S41A, C-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.
  
    0.409
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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