Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACZ09533.1PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: spe:Spro_1023 oligopeptide transporter OPT superfamily protein. (547 aa)    
Predicted Functional Partners:
ACZ09532.1
PFAM: protein of unknown function DUF917; KEGG: rle:RL0366 hypothetical protein.
 
     0.930
ACZ09530.1
PFAM: AroM family protein; KEGG: eta:ETA_25570 protein of aro operon, regulated by AroR.
 
     0.928
ACZ09531.1
PFAM: protein of unknown function DUF1177; KEGG: spe:Spro_1024 hypothetical protein.
 
     0.927
ACZ09529.1
Leucyl aminopeptidase (aminopeptidase T)-like protein; KEGG: glo:Glov_0659 hypothetical protein.
 
     0.895
ACZ09534.1
PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: cff:CFF8240_0846 DNA-binding protein HU; Belongs to the bacterial histone-like protein family.
       0.418
ACZ08893.1
KEGG: dde:Dde_3031 hypothetical protein.
  
     0.414
ACZ08894.1
KEGG: sit:TM1040_0517 hypothetical protein.
  
     0.413
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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