STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09545.1PFAM: NLP/P60 protein; KEGG: bbr:BB2967 hypothetical protein. (188 aa)    
Predicted Functional Partners:
ACZ09554.1
PFAM: protein of unknown function DUF214; KEGG: net:Neut_1527 hypothetical protein.
  
 
 0.639
ACZ07069.1
Carboxyl-terminal protease; KEGG: tdn:Suden_0492 peptidase S41A, C-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.
    
 
 0.498
ACZ09555.1
PFAM: ABC transporter related; KEGG: cla:Cla_0918 ABC transporter, ATP-binding protein.
  
 
 0.480
ACZ08665.1
PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: gbm:Gbem_1752 cell wall hydrolase/autolysin.
 
  
 0.435
ACZ07863.1
PFAM: OmpA/MotB domain protein; KEGG: smt:Smal_0800 OmpA/MotB domain protein.
 
 
 0.406
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.