STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09549.1KEGG: vsp:VS_II0460 predicted membrane protein. (655 aa)    
Predicted Functional Partners:
ACZ07154.1
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: lpc:LPC_2694 nitrogen fixation protein (Fe-S cluster formation) NifU.
   
    0.735
ACZ10835.1
TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: sse:Ssed_2728 hypothetical protein; Belongs to the aspartate/glutamate racemases family.
   
    0.521
ACZ10069.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; KEGG: ent:Ent638_4206 outer membrane autotransporter.
  
     0.503
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
     0.497
ACZ09481.1
PFAM: secretion protein HlyD family protein; KEGG: tcx:Tcr_1133 secretion protein HlyD.
 
  
 0.454
ACZ09548.1
KEGG: yen:YE1936 hypothetical protein.
       0.454
ACZ09093.1
KEGG: pcr:Pcryo_0212 negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.
 
     0.439
ACZ09326.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: prw:PsycPRwf_0549 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.
 
     0.433
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: geo:Geob_3360 phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
 
   0.403
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.