STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09556.1PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1215 sugar (glycoside-pentoside- hexuronide) transporter. (442 aa)    
Predicted Functional Partners:
tmcAL
Protein of unknown function DUF795; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
  
    0.813
ACZ09557.1
KEGG: hypothetical protein.
     
 0.797
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
 
     0.753
ACZ09171.1
PFAM: protein of unknown function DUF448; KEGG: gur:Gura_1900 hypothetical protein.
  
     0.735
ACZ07138.1
PFAM: protein of unknown function DUF490; KEGG: rsq:Rsph17025_2622 hypothetical protein.
  
     0.720
ACZ07275.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein.
  
     0.692
ACZ08638.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein.
  
     0.688
ACZ10339.1
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein.
  
     0.684
ACZ10275.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein.
 
     0.680
ACZ10932.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein.
  
     0.678
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.