STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09616.1TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; peptidase S14 ClpP; KEGG: vha:VIBHAR_03044 protease. (584 aa)    
Predicted Functional Partners:
ACZ10580.1
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; phosphopantetheine- binding; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase.
 
  
 0.534
ACZ09615.1
PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein.
       0.520
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
 
     0.487
ACZ09556.1
PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1215 sugar (glycoside-pentoside- hexuronide) transporter.
 
  
 0.468
ACZ07139.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bba:Bd1493 hypothetical protein.
  
   
 0.442
ACZ07604.1
TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: pin:Ping_1819 putative ribonuclease BN.
 
  
 0.403
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.