STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09713.1Hypothetical protein; KEGG: gbm:Gbem_2989 phage regulatory protein, Rha family. (226 aa)    
Predicted Functional Partners:
ACZ09712.1
Hypothetical protein.
       0.773
ACZ09711.1
Hypothetical protein.
       0.718
ACZ09710.1
Hypothetical protein.
       0.515
ACZ08272.1
KEGG: ecr:ECIAI1_2661 conserved hypothetical protein from bacteriophage origin.
 
    0.444
ACZ09708.1
Hypothetical protein.
       0.434
ACZ09709.1
Hypothetical protein.
       0.434
ACZ08277.1
PFAM: SNF2-related protein; SMART: DEAD-like helicase; KEGG: xfm:Xfasm12_0427 hypothetical protein.
 
     0.414
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.