STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09716.1PFAM: ERF family protein; KEGG: eck:EC55989_2645 DNA single-strand annealing protein; essential recombination function protein Erf. (204 aa)    
Predicted Functional Partners:
ACZ09717.1
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pca:Pcar_0643 ssDNA-binding protein.
       0.784
ACZ09718.1
Hypothetical protein.
       0.620
ACZ09719.1
PFAM: pentapeptide repeat containing protein; KEGG: hit:NTHI1489 hypothetical protein.
       0.616
ACZ09720.1
Hypothetical protein.
       0.522
ACZ09721.1
Hypothetical protein.
       0.518
ACZ09722.1
Hypothetical protein.
       0.518
ACZ09723.1
Hypothetical protein.
       0.518
ACZ09724.1
KEGG: ccv:CCV52592_0062 hypothetical protein.
       0.518
ACZ09725.1
Hypothetical protein.
       0.518
ACZ09726.1
Hypothetical protein.
       0.518
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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