STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09779.1TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: rbo:A1I_07095 DNA repair protein RadC; Belongs to the UPF0758 family. (227 aa)    
Predicted Functional Partners:
ACZ09780.1
PFAM: PSP1 domain protein; KEGG: signal peptidase-like protein.
 
     0.830
ACZ09781.1
PFAM: PSP1 domain protein; KEGG: signal peptidase-like protein.
 
     0.822
ACZ09782.1
PFAM: methyltransferase small; KEGG: cju:C8J_0457 hypothetical protein; Belongs to the methyltransferase superfamily.
       0.787
ACZ08429.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.740
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
 
   
 0.738
ACZ09893.1
KEGG: nse:NSE_0416 putative competence protein F.
 
    0.678
ACZ10506.1
TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: sat:SYN_02533 metallo-beta-lactamase superfamily protein.
 
  
 0.662
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
 
   
 0.654
ACZ08100.1
PFAM: SMF family protein; KEGG: ppd:Ppro_0529 DNA protecting protein DprA.
 
  
 0.609
ACZ09551.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
 
   
 0.573
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.