Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACZ09782.1PFAM: methyltransferase small; KEGG: cju:C8J_0457 hypothetical protein; Belongs to the methyltransferase superfamily. (222 aa)    
Predicted Functional Partners:
ACZ09780.1
PFAM: PSP1 domain protein; KEGG: signal peptidase-like protein.
 
    0.845
ACZ09781.1
PFAM: PSP1 domain protein; KEGG: signal peptidase-like protein.
 
    0.837
ACZ09779.1
TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: rbo:A1I_07095 DNA repair protein RadC; Belongs to the UPF0758 family.
       0.787
tmcAL
Protein of unknown function DUF795; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
 
     0.667
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
 
  
 0.603
ACZ08462.1
PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; KEGG: sun:SUN_1130 hypothetical protein.
  
  
 0.507
ACZ09778.1
Hypothetical protein.
       0.405
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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