STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09877.1PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pap:PSPA7_3451 hypothetical protein. (179 aa)    
Predicted Functional Partners:
ACZ09876.1
PFAM: aspartate/glutamate/uridylate kinase; KEGG: vok:COSY_0382 glutamate 5-kinase.
       0.780
ACZ09878.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: abn:AB57_3169 transcriptional regulator, LysR family.
 
     0.682
ACZ07209.1
Transcriptional regulator, CarD family; PFAM: transcription factor CarD; KEGG: pub:SAR11_0423 hypothetical protein.
 
     0.455
ACZ07093.1
PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_4404 major facilitator family transporter.
 
     0.410
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.409
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.