STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xylBTIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: ecl:EcolC_0150 xylulokinase. (489 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; KEGG: hypothetical protein LOC100208276; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
 
 0.984
ACZ06923.1
L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: pca:Pcar_3030 L-fuculose-1-phosphate aldolase.
  
 
 0.937
ACZ07010.1
TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: msu:MS0046 L-ribulose-5-phosphate 4-epimerase.
  
 
 0.937
ACZ07032.1
TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: msu:MS0046 L-ribulose-5-phosphate 4-epimerase.
  
 
 0.937
ACZ08898.1
Ribulose-phosphate 3-epimerase; KEGG: gme:Gmet_0067 ribulose-5-phosphate 3- epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'- phosphate decarboxylase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.926
ACZ10671.1
PFAM: ribulose-phosphate 3-epimerase; KEGG: dde:Dde_2632 ribulose-5-phosphate 3-epimerase.
   
 0.919
ACZ10958.1
PFAM: ribulose-phosphate 3-epimerase; KEGG: cla:Cla_1028 D-ribulose-5-phosphate 3- epimerase.
   
 0.919
ACZ07157.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sei:SPC_3669 hypothetical protein.
    
 0.914
ACZ09882.1
PFAM: inner-membrane translocator; KEGG: hip:CGSHiEE_06515 D-xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.560
ACZ09884.1
TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: apa:APP7_1998 D-xylose transporter subunit XylF.
 
   
 0.556
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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