STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09884.1TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: apa:APP7_1998 D-xylose transporter subunit XylF. (347 aa)    
Predicted Functional Partners:
ACZ09882.1
PFAM: inner-membrane translocator; KEGG: hip:CGSHiEE_06515 D-xylose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
ACZ09883.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_1866 D-xylose ABC transporter, ATPase subunit.
 
 0.974
xylA
Xylose isomerase; KEGG: hypothetical protein LOC100208276; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
  
 0.863
ACZ07158.1
KEGG: msu:MS0201 RbsB protein.
 
  
 0.576
xylB
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: ecl:EcolC_0150 xylulokinase.
 
   
 0.556
ACZ08350.1
PFAM: inner-membrane translocator; KEGG: hsm:HSM_0091 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.553
ACZ10373.1
PFAM: inner-membrane translocator; KEGG: ecv:APECO1_3187 putative ribose transport system permease protein RbsC.
  
 0.553
ACZ10288.1
PFAM: inner-membrane translocator; KEGG: vvu:VV2_0063 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.526
ACZ09889.1
PFAM: inner-membrane translocator; KEGG: tau:Tola_1972 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.500
ACZ07160.1
PFAM: inner-membrane translocator; KEGG: msu:MS0199 AraH protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.478
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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