STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09904.1PFAM: Vault protein inter-alpha-trypsin domain protein; KEGG: rfr:Rfer_2477 hypothetical protein. (984 aa)    
Predicted Functional Partners:
ACZ08910.1
KEGG: pfo:Pfl01_1947 hypothetical protein.
  
     0.567
ACZ09553.1
PFAM: Peptidase M23; KEGG: cvi:CV_3353 hypothetical protein.
   
 
 0.542
ACZ10153.1
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sil:SPO1186 TPR domain-containing protein.
 
 
 
 0.499
ACZ09475.1
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sde:Sde_0275 SPFH domain-containing protein/band 7 family protein.
 
     0.494
ACZ06970.1
KEGG: scl:sce4731 hypothetical protein.
  
     0.477
ACZ09902.1
Pseudouridylate synthase-like protein; KEGG: abu:Abu_2199 tRNA pseudouridine synthase A.
       0.469
ACZ09903.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dat:HRM2_44240 Gph2.
       0.467
ACZ09901.1
Hypothetical protein.
       0.464
ACZ07631.1
TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027; KEGG: mxa:MXAN_1238 hypothetical protein.
 
     0.462
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.458
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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