STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACZ09913.1Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tau:Tola_1975 transcriptional regulator, RpiR family. (261 aa)    
Predicted Functional Partners:
ACZ09914.1
TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: rlt:Rleg2_5489 ROK family protein.
  
  
 0.763
ACZ09916.1
PFAM: chemotaxis sensory transducer; KEGG: vfi:VF_A1084 methyl-accepting chemotaxis protein.
     
 0.728
ACZ09917.1
Putative methyl-accepting chemotaxis sensory transducer.
     
 0.728
ACZ09915.1
KEGG: dal:Dalk_3928 CheW protein.
       0.727
ACZ09918.1
KEGG: hypothetical protein.
       0.727
ACZ09919.1
SMART: CheW domain protein; KEGG: nis:NIS_0604 chemotaxis sensor histidine kinase CheA.
     
 0.643
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.624
ACZ09911.1
Hypothetical protein.
       0.451
ACZ09912.1
KEGG: gur:Gura_2446 PEP phosphonomutase and related enzymes-like protein.
       0.451
ACZ10666.1
PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: ent:Ent638_3046 phosphotransferase system, EIIC.
 
  
 0.406
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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