STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tsaDMetalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (333 aa)    
Predicted Functional Partners:
ACZ07491.1
PFAM: peptidase M22 glycoprotease; KEGG: pca:Pcar_1913 metal-dependent protease.
 
 
 0.957
ACZ09934.1
Mn2+dependent serine/threonine protein kinase; KEGG: abu:Abu_1820 hypothetical protein.
  
 0.953
ACZ07490.1
PFAM: protein of unknown function UPF0079; KEGG: sat:SYN_02780 ATP/GTP hydrolase.
 
 
 0.905
ACZ07514.1
TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: glo:Glov_1843 SUA5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
 
 0.806
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.800
ACZ09931.1
PFAM: glycosyl transferase family 9; KEGG: lip:LI0698 ADP-heptose:LPS heptosyltransferase II.
       0.785
ACZ09932.1
PFAM: glycosyl transferase family 9; KEGG: dvm:DvMF_3136 lipopolysaccharide heptosyltransferase II.
       0.783
pheS
KEGG: geo:Geob_3361 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
   
 0.740
ACZ09929.1
Hypothetical protein; KEGG: mature-parasite-infected erythrocyte surface antigen.
       0.724
ACZ09937.1
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; KEGG: gur:Gura_2302 NAD-dependent epimerase/dehydratase.
  
  
 0.682
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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