STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACZ09931.1PFAM: glycosyl transferase family 9; KEGG: lip:LI0698 ADP-heptose:LPS heptosyltransferase II. (330 aa)    
Predicted Functional Partners:
ACZ09932.1
PFAM: glycosyl transferase family 9; KEGG: dvm:DvMF_3136 lipopolysaccharide heptosyltransferase II.
 
    
0.833
ACZ07121.1
TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: nam:NAMH_1710 bifunctional protein HldE.
 
   
 0.800
ACZ09260.1
TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: abu:Abu_1797 ADP-heptose synthase.
 
   
 0.800
ACZ07489.1
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
 
   
 0.798
ACZ09946.1
PFAM: glycosyl transferase family 9; KEGG: hdu:HD1720 lipooligosaccharide D-glycero-D- manno-heptosyltransferase.
 
     0.794
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.785
ACZ09933.1
ADP-heptose:LPS heptosyltransferase-like protein; KEGG: asa:ASA_0099 ADP-heptose:LPS heptosyltransferase II.
 
    
0.761
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
 
  
 0.735
ACZ07040.1
TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: apa:APP7_0902 D,D-heptose 1,7-bisphosphate phosphatase.
 
   
 0.701
ACZ09935.1
PFAM: glycosyl transferase group 1; KEGG: dvu:DVU3192 glycosyl transferase, group 1 family protein.
  
  
 0.701
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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