STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09947.1PFAM: polysaccharide deacetylase; KEGG: ecw:EcE24377A_F0046 polysaccharide deacetylase family protein. (336 aa)    
Predicted Functional Partners:
ACZ09948.1
KEGG: ecq:ECED1_3599 hypothetical protein.
     
 0.798
ACZ09945.1
PFAM: glycosyl transferase group 1; KEGG: hap:HAPS_1022 glycosyl transferase, group 1.
 
  
 0.752
ACZ09946.1
PFAM: glycosyl transferase family 9; KEGG: hdu:HD1720 lipooligosaccharide D-glycero-D- manno-heptosyltransferase.
       0.647
ACZ09944.1
Hypothetical protein; KEGG: abu:Abu_1814 putative O-antigen polymerase.
       0.615
ACZ09942.1
PFAM: glycosyl transferase family 2; KEGG: hso:HS_0291 UDP-glucose--lipooligosaccharide beta 1-4 glucosyltransferase.
 
  
 0.559
ACZ09943.1
ADP-heptose:LPS heptosyltransferase-like protein; KEGG: ppd:Ppro_3391 glycosyl transferase family protein.
       0.544
ACZ10523.1
PFAM: glycosyl transferase family 39; KEGG: abc:ACICU_02868 4-amino-4-deoxy-L-arabinose transferase.
 
  
 0.539
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
  
 0.501
ACZ09941.1
PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_0195 glycosyl transferase, group 1.
 
  
 0.498
ACZ09940.1
PFAM: glycosyl transferase group 1; KEGG: wsu:WS0250 galactosyltransferase.
 
  
 0.495
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.