STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09955.1PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: lpc:LPC_1058 3-beta-hydroxysteroid dehydrogenase/isomerase. (333 aa)    
Predicted Functional Partners:
ACZ09952.1
TIGRFAM: adenylate-forming enzyme; KEGG: lpc:LPC_1055 coenzyme F390 synthetase FtsA.
 
     0.853
ACZ09956.1
KEGG: ypk:y2326 hypothetical protein.
 
  
 0.840
ACZ09953.1
PFAM: beta-lactamase domain protein; KEGG: lpp:lpp1599 hypothetical protein.
 
  
 0.831
ACZ09954.1
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; KEGG: lpp:lpp1601 3-oxoacyl-(acyl carrier protein) synthase III.
 
   
 0.818
ACZ09957.1
KEGG: ypi:YpsIP31758_2102 hypothetical protein.
  
  
 0.812
ACZ09958.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_5145 putative short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.802
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
 0.764
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
 0.759
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.756
ACZ08809.1
PFAM: AMP-dependent synthetase and ligase; KEGG: bba:Bd3151 AMP-ligase.
 
 
 0.751
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.