STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ09966.1PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: ppr:PBPRA1380 putative heat shock protein HslJ. (143 aa)    
Predicted Functional Partners:
ACZ09965.1
KEGG: eba:p1B263 hypothetical protein.
   
   0.542
ACZ09964.1
PFAM: metallophosphoesterase; KEGG: bra:BRADO3710 putative protein serine- threonine phosphatase.
       0.513
ACZ10679.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein.
  
     0.492
ACZ09933.1
ADP-heptose:LPS heptosyltransferase-like protein; KEGG: asa:ASA_0099 ADP-heptose:LPS heptosyltransferase II.
 
     0.486
ACZ07600.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 putative outer membrane autotransporter barrel domain protein.
 
     0.456
ACZ07928.1
TIGRFAM: conserved repeat domain protein; KEGG: vha:VIBHAR_05162 hypothetical protein.
  
   
 0.442
ACZ08836.1
PFAM: protein of unknown function YGGT; KEGG: hha:Hhal_0947 protein of unknown function YGGT.
 
     0.403
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.