STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10002.1KEGG: ppw:PputW619_2987 hypothetical protein. (437 aa)    
Predicted Functional Partners:
ACZ08784.1
PFAM: protein of unknown function DUF344; KEGG: gme:Gmet_1092 polyphosphate:AMP phosphotransferase.
 
     0.491
ACZ10001.1
Transcriptional antiterminator, BglG; PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; KEGG: eca:ECA0343 PTS system regulatory protein.
       0.449
ACZ10279.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_5704 oxidoreductase, short chain dehydrogenase/reductase family.
  
     0.438
ACZ10000.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sea:SeAg_B4010 putative phosphoenolpyruvate- dependent sugar phosphotransferase system, eiia 2.
       0.427
ACZ10003.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dds:Ddes_2109 ABC transporter related.
       0.424
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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