STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10008.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd0709 macrolide ABC transporter ATP- binding protein. (252 aa)    
Predicted Functional Partners:
ACZ10009.1
PFAM: protein of unknown function DUF214; KEGG: cla:Cla_1167 ABC transporter, permease protein.
 
 
 0.996
ACZ08929.1
PFAM: protein of unknown function DUF214; KEGG: bba:Bd0709 macrolide ABC transporter ATP- binding protein.
 
 0.981
ACZ08422.1
PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_0837 lipoprotein releasing system, transmembrane protein, LolC/E family.
  
 
 0.779
ACZ09133.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ara:Arad_9869 nitrate/sulfonate ABC transporter.
 
    0.755
ACZ10011.1
PFAM: regulatory protein TetR; KEGG: smd:Smed_3750 TetR family transcriptional regulator.
   
 
 0.661
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
 
   
 0.638
ACZ10010.1
Hypothetical protein.
       0.631
ACZ08430.1
Hypothetical protein; KEGG: CG12455 gene product from transcript CG12455- RA.
   
 
 0.614
ACZ10007.1
PFAM: MltA-interacting MipA family protein; KEGG: ent:Ent638_1672 MltA-interacting MipA family protein.
     
 0.565
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.555
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.