STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10009.1PFAM: protein of unknown function DUF214; KEGG: cla:Cla_1167 ABC transporter, permease protein. (773 aa)    
Predicted Functional Partners:
ACZ10008.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd0709 macrolide ABC transporter ATP- binding protein.
 
 
 0.996
ACZ08831.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: glo:Glov_1037 ABC transporter related.
 
 
 0.973
lolD
ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
 
 0.970
ACZ08928.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_4199 putative macrolide efflux ABC transporter, ATP-binding protein.
  
 
 0.970
ACZ10011.1
PFAM: regulatory protein TetR; KEGG: smd:Smed_3750 TetR family transcriptional regulator.
 
  
 0.811
ACZ08430.1
Hypothetical protein; KEGG: CG12455 gene product from transcript CG12455- RA.
  
 
 0.777
ACZ08089.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: cla:Cla_0919 AcrA/AcrE family efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.774
ACZ08090.1
KEGG: lpp:lpp0078 hypothetical protein.
  
 
 0.774
ACZ08927.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: asu:Asuc_1346 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.774
ACZ10137.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shl:Shal_3932 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.774
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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