STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10010.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
ACZ10011.1
PFAM: regulatory protein TetR; KEGG: smd:Smed_3750 TetR family transcriptional regulator.
       0.757
ACZ10009.1
PFAM: protein of unknown function DUF214; KEGG: cla:Cla_1167 ABC transporter, permease protein.
       0.686
ACZ10008.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bba:Bd0709 macrolide ABC transporter ATP- binding protein.
       0.631
ACZ10007.1
PFAM: MltA-interacting MipA family protein; KEGG: ent:Ent638_1672 MltA-interacting MipA family protein.
       0.449
ACZ10012.1
Putative virion core protein (lumpy skin disease virus)-like protein; KEGG: smt:Smal_2106 hypothetical protein.
       0.432
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.