STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10117.1KEGG: gme:Gmet_1800 coenzyme F390 synthetase-like. (417 aa)    
Predicted Functional Partners:
ACZ10116.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_0225 Fe-S oxidoreductase.
 
     0.927
ACZ10113.1
KEGG: dvl:Dvul_1576 hypothetical protein.
 
     0.896
ACZ10112.1
KEGG: dps:DP0269 Fe-S oxidoreductase.
 
   
 0.893
ACZ10115.1
TIGRFAM: C_GCAxxG_C_C family protein; KEGG: sfu:Sfum_1313 hypothetical protein.
 
    0.893
ACZ10111.1
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sfu:Sfum_1310 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
     0.839
ACZ10114.1
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: gbm:Gbem_2617 methyltransferase type 11.
 
     0.813
ACZ08554.1
PFAM: protein of unknown function DUF182; KEGG: shl:Shal_0645 hypothetical protein.
     0.572
ACZ10073.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: dal:Dalk_4094 cupin 2 domain-containing protein.
 
    0.507
ACZ10449.1
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.487
ACZ08377.1
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: sfr:Sfri_1898 iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.479
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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