STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10123.1PFAM: periplasmic solute binding protein; KEGG: tcx:Tcr_2149 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. (311 aa)    
Predicted Functional Partners:
ACZ10125.1
PFAM: ABC-3 protein; KEGG: tcx:Tcr_2147 ABC-type Mn2+/Zn2+ transport systems permease components.
 
 0.995
ACZ10124.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_2839 ABC transporter related.
 
 
 0.994
ACZ10126.1
PFAM: ABC-3 protein; KEGG: tcx:Tcr_2146 hypothetical protein.
 
 0.994
ACZ10641.1
PFAM: ABC-3 protein; KEGG: cco:CCC13826_1789 oligoendopeptidase F.
  
 0.923
ACZ10122.1
PFAM: iron dependent repressor; FeoA family protein; regulatory protein MarR; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
 
  
 0.876
ACZ10640.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: abu:Abu_0554 ABC transporter, ATP-binding protein.
 
  
 0.868
ACZ08540.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VP0982 lipid transporter ATP- binding/permease protein.
  
  
 0.614
rpmB
TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: pca:Pcar_1289 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.576
rpsN
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.567
ACZ08960.1
KEGG: dno:DNO_1110 phosphoribosylformylglycinamidine synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein.
     
 0.461
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.