STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10124.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_2839 ABC transporter related. (249 aa)    
Predicted Functional Partners:
ACZ10125.1
PFAM: ABC-3 protein; KEGG: tcx:Tcr_2147 ABC-type Mn2+/Zn2+ transport systems permease components.
 
 0.998
ACZ10126.1
PFAM: ABC-3 protein; KEGG: tcx:Tcr_2146 hypothetical protein.
 
 0.998
ACZ10123.1
PFAM: periplasmic solute binding protein; KEGG: tcx:Tcr_2149 periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.994
ACZ10641.1
PFAM: ABC-3 protein; KEGG: cco:CCC13826_1789 oligoendopeptidase F.
 
 
 0.948
ACZ10639.1
PFAM: periplasmic solute binding protein; KEGG: cco:CCC13826_1793 putative carbon storage regulator-like protein.
 
  
 0.880
ACZ10122.1
PFAM: iron dependent repressor; FeoA family protein; regulatory protein MarR; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
 
  
 0.797
ACZ10638.1
KEGG: abu:Abu_1740 FUR family transcriptional regulator; Belongs to the Fur family.
  
  
 0.466
ACZ10903.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: abu:Abu_0880 peroxide stress regulator; Belongs to the Fur family.
  
  
 0.466
ACZ07453.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: cja:CJA_1779 MotA/TolQ/ExbB proton channel family domain protein.
  
  
 0.430
ACZ10406.1
Iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
 
  
 0.412
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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