STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10234.1TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sat:SYN_01968 sodium driven multidrug efflux pump. (461 aa)    
Predicted Functional Partners:
ACZ07115.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: nmc:NMC2137 glyceraldehyde 3-phosphate dehydrogenase C; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.481
ACZ10924.1
PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: dal:Dalk_0933 ribosomal protein S1.
  
    0.446
ACZ09486.1
PFAM: MscS Mechanosensitive ion channel; KEGG: tcx:Tcr_1584 MscS mechanosensitive ion channel.
 
     0.445
ACZ10235.1
PFAM: PTS system fructose subfamily IIA component; KEGG: vvy:VV0540 phosphotransferase system, mannose/fructose-specific component IIA.
       0.421
ACZ10236.1
TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: ecl:EcolC_0558 PTS system mannose/fructose/sorbose family IID subunit.
       0.411
ACZ10237.1
PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: ent:Ent638_3580 N-acetylgalactosamine- specific PTS system transporter subunit IIC.
       0.411
ACZ10238.1
KEGG: ecg:E2348C_3424 N-acetylgalactosamine- specific PTS system transporter subunit IIB; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component.
       0.404
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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