STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10261.12-aminoethylphosphonate/pyruvate transaminase; Involved in phosphonate degradation. (370 aa)    
Predicted Functional Partners:
ACZ10260.1
KEGG: abb:ABBFA_002146 phosphonoacetaldehyde hydrolase; TIGRFAM: phosphonoacetaldehyde hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase.
  
 0.999
ACZ10259.1
PFAM: aminotransferase class-III; KEGG: vvy:VVA0475 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.991
ACZ10257.1
PFAM: extracellular solute-binding protein family 1; KEGG: cjj:CJJ81176_0750 ABC transporter, periplasmic substrate-binding protein.
  
  
 0.830
ACZ10255.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF_A1090 ABC transporter permease protein.
       0.785
ACZ10258.1
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cak:Caul_4076 phosphotransferase domain- containing protein.
  
    0.785
ACZ10256.1
KEGG: spe:Spro_4486 binding-protein-dependent transport systems inner membrane component.
       0.773
ACZ10254.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_3496 ABC transporter related; Belongs to the ABC transporter superfamily.
  
    0.722
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.600
purD
Phosphoribosylamine/glycine ligase; KEGG: dno:DNO_0940 phosphoribosylglycinamide synthetase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; Belongs to the GARS family.
  
  
 0.589
ACZ09194.1
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: glo:Glov_3016 glutamate synthase (ferredoxin).
  
  
 0.503
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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