STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10274.1KEGG: scl:sce5277 hypothetical protein. (105 aa)    
Predicted Functional Partners:
ACZ06970.1
KEGG: scl:sce4731 hypothetical protein.
 
     0.723
ACZ08731.1
KEGG: hch:HCH_05472 hypothetical protein.
  
     0.708
ACZ09979.1
KEGG: hypothetical protein.
  
     0.686
kptA
Phosphotransferase KptA/Tpt1; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
    0.586
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
 
 0.581
ACZ09978.1
PFAM: conserved hypothetical protein; KEGG: hypothetical protein.
 
   
 0.579
ACZ09742.1
TIGRFAM: RNA ligase, DRB0094 family; KEGG: hypothetical protein.
 
   
 0.568
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
  
 0.554
ACZ08774.1
PFAM: regulatory protein TetR; KEGG: dat:HRM2_40370 HTH-type transcriptional regulator (MtrR family protein).
  
   
 0.535
ACZ06961.1
Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; KEGG: eca:ECA1475 hypothetical protein.
 
     0.528
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.