STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10280.1PFAM: aldo/keto reductase; KEGG: prostaglandin f2-alpha synthase. (280 aa)    
Predicted Functional Partners:
ACZ10057.1
PFAM: aldo/keto reductase; KEGG: ecm:EcSMS35_1420 oxidoreductase, aldo/keto reductase family.
 
0.938
ACZ10340.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msu:MS0597 GloA protein.
  
 0.924
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
     
 0.907
ACZ07935.1
PFAM: iron-containing alcohol dehydrogenase; 3- dehydroquinate synthase; KEGG: ecv:APECO1_2102 glycerol dehydrogenase.
    
 0.906
ACZ07473.1
PFAM: aldo/keto reductase; KEGG: prostaglandin f synthase; K00120.
  
  
 
0.904
ACZ06988.1
TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: ade:Adeh_3448 L-threonine ammonia-lyase.
  
 
 0.828
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.808
ACZ10279.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_5704 oxidoreductase, short chain dehydrogenase/reductase family.
  
 
 0.801
ACZ08925.1
PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: dde:Dde_3034 L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
  0.800
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
  0.800
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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