STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10291.1PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: hypothetical protein. (311 aa)    
Predicted Functional Partners:
ACZ10292.1
PFAM: ROK family protein; KEGG: yen:YE2511 hypothetical protein.
     
 0.783
ACZ10290.1
Hypothetical protein; KEGG: similar to sds22 CG5851-PA.
       0.773
ACZ10289.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hap:HAPS_1727 ABC D-ribose transporter ATP binding protein RbsA.
       0.757
ACZ10288.1
PFAM: inner-membrane translocator; KEGG: vvu:VV2_0063 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.731
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.707
ACZ10287.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ara:Arad_8181 ribose ABC transporter.
       0.688
ACZ07103.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: vvy:VVA1580 galactonate dehydratase protein.
 
    0.444
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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