STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10311.1Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: see:SNSL254_A3874 GntR family regulatory protein. (238 aa)    
Predicted Functional Partners:
ACZ07810.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: sme:SMc03140 putative transcription regulator protein.
  
     0.773
ACZ10312.1
PFAM: sugar isomerase (SIS); KEGG: sea:SeAg_B3807 sugar isomerase.
 
  
 0.649
ACZ09975.1
TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: yen:YE0580 nicotinamide-nucleotide adenylyltransferase.
   
  
 0.560
ACZ10310.1
KEGG: spc:Sputcn32_1424 hypothetical protein.
       0.545
ACZ10437.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: seg:SG1499 putative GntR-family regulatory protein.
  
  
 0.523
ACZ10518.1
Transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gur:Gura_0980 XRE family transcriptional regulator.
  
  
 0.478
ACZ10072.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4095 transcriptional regulator, AraC family.
  
  
 0.471
ACZ10309.1
Hypothetical protein.
       0.471
ACZ10307.1
TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: asu:Asuc_0975 PTS system, beta-glucoside- specific IIABC subunit.
  
  
 0.467
ACZ10314.1
PFAM: PTS system sorbose subfamily IIB component; KEGG: kpn:KPN_04803 putative PTS permease.
  
    0.449
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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