STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10312.1PFAM: sugar isomerase (SIS); KEGG: sea:SeAg_B3807 sugar isomerase. (330 aa)    
Predicted Functional Partners:
ACZ10313.1
PFAM: PTS system fructose subfamily IIA component; KEGG: kpe:KPK_4812 PTS system, IIA component.
 
  
 0.770
ACZ10314.1
PFAM: PTS system sorbose subfamily IIB component; KEGG: kpn:KPN_04803 putative PTS permease.
 
  
 0.761
ACZ10315.1
PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: kpn:KPN_04804 putative PTS permease.
 
  
 0.742
ACZ10316.1
PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: kpe:KPK_4809 PTS system, IID component.
 
  
 0.711
ACZ10311.1
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: see:SNSL254_A3874 GntR family regulatory protein.
 
  
 0.629
ACZ10307.1
TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: asu:Asuc_0975 PTS system, beta-glucoside- specific IIABC subunit.
  
  
 0.419
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.