STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10319.1Hypothetical protein; KEGG: avn:Avin_09150 RhaT L-rhamnose-proton symport 2. (333 aa)    
Predicted Functional Partners:
ACZ10320.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sgl:SG0171 hypothetical protein.
 
     0.802
ACZ10321.1
PFAM: amidohydrolase 2; KEGG: rec:RHECIAT_PA0000354 putative amidohydrolase protein.
 
     0.776
ACZ10324.1
PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_2273 hypothetical protein.
 
     0.771
ACZ10322.1
PFAM: protein of unknown function DUF718; KEGG: sgl:SG0170 hypothetical protein.
 
   
 0.645
ACZ10325.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2274 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
     0.644
rhaA
KEGG: sek:SSPA3617 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
  
 0.559
ACZ10620.1
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
   
 0.532
ACZ10323.1
PFAM: dihydrodipicolinate synthetase; KEGG: smd:Smed_3832 N-acetylneuraminate lyase.
     
 0.528
ACZ10318.1
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: cjd:JJD26997_1454 IclR family transcriptional regulator.
       0.419
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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