STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10320.1PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sgl:SG0171 hypothetical protein. (358 aa)    
Predicted Functional Partners:
ACZ10321.1
PFAM: amidohydrolase 2; KEGG: rec:RHECIAT_PA0000354 putative amidohydrolase protein.
 
   
 0.933
ACZ10322.1
PFAM: protein of unknown function DUF718; KEGG: sgl:SG0170 hypothetical protein.
 
    0.907
ACZ10324.1
PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_2273 hypothetical protein.
 
   
 0.895
ACZ10325.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2274 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
  
 0.887
ACZ10319.1
Hypothetical protein; KEGG: avn:Avin_09150 RhaT L-rhamnose-proton symport 2.
 
     0.802
ACZ10326.1
PFAM: MaoC domain protein dehydratase; KEGG: oan:Oant_0316 MaoC domain protein dehydratase.
 
   
 0.785
ACZ10323.1
PFAM: dihydrodipicolinate synthetase; KEGG: smd:Smed_3832 N-acetylneuraminate lyase.
     
 0.655
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gme:Gmet_2360 lysyl-tRNA synthetase, class-2; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.476
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.409
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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