STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10330.1Hypothetical protein; KEGG: bba:Bd2899 protoporphyrinogen oxidase. (176 aa)    
Predicted Functional Partners:
ACZ10589.1
Hypothetical protein.
  
     0.535
ACZ09076.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_4700 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.481
ACZ10331.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tau:Tola_0789 transcriptional regulator, LysR family.
       0.453
ACZ09590.1
Hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein; KEGG: ret:RHE_CH00113 putative hydrolase protein.
  
     0.445
ACZ10664.1
Transcriptional regulator, MerR family; PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: dps:DP0195 multidrug-efflux transporter gene transcriptional regulator.
  
     0.427
ACZ08252.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: wpi:WPa_1341 putative transcriptional regulator.
  
     0.417
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.