STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10378.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccv:CCV52592_1481 hypothetical protein. (293 aa)    
Predicted Functional Partners:
ACZ10377.1
Hypothetical protein.
       0.682
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
  
    0.586
ACZ08208.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: fph:Fphi_1728 drug/metabolite transporter superfamily protein.
  
     0.563
ACZ10380.1
KEGG: har:HEAR3087 hypothetical protein.
       0.435
ACZ10381.1
PFAM: protein of unknown function DUF28; KEGG: sfu:Sfum_0996 protein of unknown function DUF28.
     
 0.419
ACZ09322.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: dds:Ddes_0873 protein of unknown function DUF6 transmembrane.
  
     0.405
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.