STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10507.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
ACZ10506.1
TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: sat:SYN_02533 metallo-beta-lactamase superfamily protein.
  
  
 0.885
ACZ07516.1
PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: noc:Noc_2895 type II secretion system protein E.
  
 
 0.786
ACZ07116.1
PFAM: type II secretion system protein; KEGG: hdu:HD1125 pili/fimbriae biogenesis protein.
  
  
 0.778
ACZ10505.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ppr:PBPRB0932 hypothetical protein.
       0.576
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
  
  
 0.559
ACZ10504.1
PFAM: peptidase M50; KEGG: geo:Geob_3017 peptidase M50.
       0.558
ACZ10503.1
PFAM: protein of unknown function UPF0029; KEGG: ftn:FTN_0466 hypothetical protein.
       0.557
ACZ07129.1
PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: geo:Geob_3081 peptidase A24A domain protein.
  
  
 0.546
ACZ08100.1
PFAM: SMF family protein; KEGG: ppd:Ppro_0529 DNA protecting protein DprA.
  
  
 0.505
ACZ08393.1
KEGG: hypothetical protein.
  
  
 0.486
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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