STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10580.1PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; phosphopantetheine- binding; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase. (819 aa)    
Predicted Functional Partners:
ACZ08803.1
PFAM: hydroxymethylglutaryl-coenzyme A reductase; KEGG: vsa:VSAL_II0253 putative 3-hydroxy-3- methylglutaryl coenzyme a reductase.
  
 
 0.753
ACZ09019.1
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nme:NMB1280 very long chain acyl-CoA dehydrogenase-related protein.
  
 
 0.686
ACZ10275.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein.
 
  
 0.674
pyrD
Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
  
  
 0.662
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
 
  
 0.643
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.642
ACZ08814.1
SMART: Ankyrin; KEGG: smd:Smed_3569 ankyrin.
  
 0.639
ACZ10711.1
PFAM: Ankyrin; SMART: Ankyrin; KEGG: ankyrin 2,3/unc44.
  
 0.639
ACZ08007.1
Hypothetical protein.
  
 0.638
ACZ10558.1
TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein.
  
    0.636
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.