STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rhaDRhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. (274 aa)    
Predicted Functional Partners:
ACZ10622.1
Rhamnulokinase; KEGG: tau:Tola_1043 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: carbohydrate kinase FGGY.
 
 
 0.989
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.913
ACZ10620.1
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.911
ACZ07379.1
Ketose-bisphosphate aldolase; KEGG: ype:YPO3960 hypothetical protein; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.909
ACZ07529.1
PFAM: ketose-bisphosphate aldolase class-II; KEGG: pmu:PM1373 hypothetical protein.
    
 0.909
ACZ08508.1
PFAM: ketose-bisphosphate aldolase class-II; KEGG: cko:CKO_03797 hypothetical protein.
    
 0.909
ACZ08888.1
Fructose-1,6-bisphosphate aldolase, class II; KEGG: pca:Pcar_2253 fructose-bisphosphate aldolase; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.909
ACZ09594.1
Ketose-bisphosphate aldolase; KEGG: eca:ECA0338 hypothetical protein; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.909
ACZ09595.1
KEGG: eca:ECA0339 sugar-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.909
ACZ10851.1
KEGG: hsm:HSM_0819 ketose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.909
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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