STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10622.1Rhamnulokinase; KEGG: tau:Tola_1043 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: carbohydrate kinase FGGY. (485 aa)    
Predicted Functional Partners:
rhaA
KEGG: sek:SSPA3617 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
 
 0.990
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.
 
 
 0.989
ACZ10620.1
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.838
ACZ10623.1
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hso:HS_0226 LacI family transcription regulator.
   
 
 0.530
ACZ07588.1
KEGG: sme:SM_b20968 hypothetical protein.
  
   0.524
ACZ08594.1
PFAM: class II aldolase/adducin family protein; KEGG: afw:Anae109_0362 class II aldolase/adducin family protein.
 
  
 0.490
ACZ10898.1
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.446
ACZ08559.1
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gur:Gura_3463 cation diffusion facilitator family transporter.
  
    0.421
ACZ07936.1
PFAM: Transaldolase; KEGG: tau:Tola_1893 transaldolase.
  
 
 0.409
ACZ08795.1
PFAM: Transaldolase; KEGG: tau:Tola_1893 transaldolase.
  
 
 0.409
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.