STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ10717.1TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: dvu:DVU2166 holin. (138 aa)    
Predicted Functional Partners:
ACZ08272.1
KEGG: ecr:ECIAI1_2661 conserved hypothetical protein from bacteriophage origin.
 
     0.778
ACZ08273.1
KEGG: ypy:YPK_1207 hypothetical protein.
 
     0.778
ACZ08276.1
PFAM: VRR-NUC domain protein; KEGG: ypy:YPK_1202 VRR-NUC domain-containing protein.
  
     0.768
ACZ08277.1
PFAM: SNF2-related protein; SMART: DEAD-like helicase; KEGG: xfm:Xfasm12_0427 hypothetical protein.
  
     0.760
ACZ10718.1
Hypothetical protein.
       0.752
ACZ10728.1
KEGG: viral A-type inclusion protein.
 
    0.716
ACZ08275.1
PFAM: virulence-associated E family protein; KEGG: dno:DNO_0266 virulence-associated protein VapE2.
  
     0.710
ACZ08101.1
PFAM: Recombinase; Resolvase domain; KEGG: wpi:WPa_0411 site-specific recombinase, resolvase family.
 
  
 0.699
ACZ07667.1
PFAM: Recombinase; Resolvase domain; KEGG: xau:Xaut_0277 resolvase domain-containing protein.
 
  
 0.597
ACZ10719.1
PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: ppr:PBPRA1330 hypothetical protein.
       0.570
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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